FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15216758
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGTAG136550.06.0637131
GGTGTTG174000.05.9586211
GGTGTAC103350.05.7822931
GGTGTAA72000.05.61
GGTGTGA65750.05.36577941
GGTATAA80550.05.36312871
GGTGTGG129500.05.2818531
GGTGTAT83550.05.25673251
GGTGTTT119000.05.2033611
GGTGTTC190450.05.1793121
GGTGTCA67500.05.121
GGTGATT121950.05.01845031
Produced by FastQC (version 0.11.5)