FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088277

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088277
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16242501
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGTAG39950.017.3016263
AGTGAGT46300.016.3282931
GAGTAGG51750.013.7739134
GTGAGTA53400.013.6179772
TAGGAGG61450.011.95117957
TAGCATG40050.08.4494388
GTAGGAG101250.07.75111066
AGTAGGA104650.07.49928335
GAGCACA133900.07.4742349
GGAGGGG111750.07.15167769
CTAGGAG22250.06.989662650-54
AGGAGGG113200.06.93286238
AGAGCAC142550.06.86916888
GATCGGA180600.05.8604651
TTCTAGG31350.05.42009650-54
TCGGAAG214150.05.0768153
CTAACTA35300.05.017564125-129
Produced by FastQC (version 0.11.5)