FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16242501
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGTAG42550.014.3830793
AGTGAGT44350.014.286361
GTGAGTA49000.012.9306132
GAGTAGG56800.011.154934
TAGGAGG65400.09.90825757
AGTAGGA102050.06.9848125
GTAGGAG106650.06.2784816
CTAGGAG21550.06.080742450-54
AGGAGGG118600.05.82799348
TAGCATG46100.05.7787428
GATCGGA188550.05.6133651
GGAGGGG125200.05.46325879
AGAGCGT181400.05.4377078
GAGCGTC196200.05.13761479
Produced by FastQC (version 0.11.5)