Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005088299 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17053413 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCCTAAG | 2975 | 0.0 | 9.436773 | 6 |
CTAAGAG | 2830 | 0.0 | 9.411495 | 8 |
CCTAAGA | 4520 | 0.0 | 7.0074315 | 7 |
ACCCTAA | 4845 | 0.0 | 6.984438 | 5 |
TACCCTA | 4770 | 0.0 | 6.6427565 | 4 |
TTAGATC | 2480 | 0.0 | 6.15486 | 140-144 |
CTAGATC | 1630 | 0.0 | 6.095727 | 140-144 |
TAAGAGC | 5345 | 0.0 | 5.6564627 | 9 |
TAGATCG | 7820 | 0.0 | 5.2296863 | 140-144 |
CACACGT | 10635 | 0.0 | 5.064051 | 140-144 |