FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088320

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088320
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18443590
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATGAGT95300.05.99743651
CTAGATC27700.05.6631140-144
TAGATCG115300.05.579377140-144
CCAGTAA89700.05.45409737
TAATACG84350.05.37360058
TGTAGGG177100.05.338931140-144
GATCGGA395800.05.334108140-144
GTCGTGT270550.05.3246865140-144
TCGTGTA248500.05.3106833140-144
GTAGGGA173450.05.1193914140-144
CATTGAC170000.05.0644181
AGATCGG454950.05.0107064140-144
Produced by FastQC (version 0.11.5)