FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088332
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19316366
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCTAG15500.07.799113815-19
CCTCACA72350.07.35952236
CTCACAC69950.07.3034337
CCCTAGA18250.06.623904715-19
ACCCAAC97850.06.1769615
CCCAACC111400.05.94236146
CCCTCAC113650.05.25490765
CCTAGAC21900.05.191354315-19
CACCCAA117950.05.18597274
GATCGGA133400.05.0569481
TCCACCC156350.05.01752572
Produced by FastQC (version 0.11.5)