FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088333

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088333
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15654466
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTGCCCC117750.08.0696857
TTAGGCC23850.07.4867754110-114
GGTTAGG29400.06.3183527110-114
GGGTTAG27500.06.231259110-114
GGGGGGT29750.06.0008645-49
TGCCCCG164450.05.90941958
GTACCTA33000.05.628042735-39
TGCTAGC8509.767973E-105.251581785-89
CTAGATC9051.7462298E-105.250072140-144
GTTAGGC34500.05.2173796110-114
CTTTCCT202400.05.2080631
CTAGCGT8454.5965862E-95.1119990-94
GCTAGCG8852.8103386E-95.043892485-89
Produced by FastQC (version 0.11.5)