Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005088352 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15106142 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGTGAGT | 2730 | 0.0 | 14.505495 | 1 |
TAAGTGG | 3140 | 0.0 | 12.382166 | 9 |
GTGAGTA | 3515 | 0.0 | 12.085349 | 2 |
ATAAGTG | 5105 | 0.0 | 7.7571006 | 8 |
CTAGGAG | 1325 | 0.0 | 6.194717 | 50-54 |
GAGTATA | 7090 | 0.0 | 6.0930886 | 4 |
TGAGTAT | 7335 | 0.0 | 5.595092 | 3 |
GTATAAG | 7410 | 0.0 | 5.34413 | 6 |
CTAACTA | 1895 | 0.0 | 5.167282 | 125-129 |
GGTCTCT | 4890 | 5.4569682E-11 | 5.153374 | 1 |
TATAAGT | 7765 | 0.0 | 5.099807 | 7 |
TCTAGGA | 1675 | 0.0 | 5.072239 | 50-54 |