FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17011408
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCTTA40200.010.2075324
CCCTTAG38150.010.0007565
TCGTGTG65200.07.40509843
CCTTAGA55750.06.84340526
TTAGAGC53900.06.54411848
CTTAGAG58000.06.45383557
TAGAGCC68650.05.66235459
TTCGTGT92550.05.5282232
CTAGCTC13900.05.283200785-89
Produced by FastQC (version 0.11.5)