FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088398

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088398
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17991879
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA46900.011.0512737
CACTATA48200.010.9025919
ACACTAT51100.010.4247288
AAACACT96950.05.7914196
ACCAAAC102050.05.58656363
CCAAACA112600.05.05260324
Produced by FastQC (version 0.11.5)