FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16691106
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATG31700.09.0834098
CCACTCA48500.06.38226569
GTGAGTA33105.4569682E-116.31201842
TACGTTA34601.6734703E-106.03833963
AGTGAGT40305.456968E-125.9296111
TAAGGGG38901.4551915E-115.9217299
TTAGCAT62650.05.51528937
TTTAGCA75350.05.1589186
GTTACGT48702.1827873E-105.0555371
AGAGCAC136950.05.04611738
Produced by FastQC (version 0.11.5)