FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088451

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088451
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16266660
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGCTAG12659.458745E-1110.8475211
GGGGGGT34100.07.8363671
AGCTTAG25052.0008883E-117.496061
AGCTAGC11050.00141389567.17280772
GGGGGGA63100.06.9818081
GGGGGGC64550.05.92989541
GGGGGGG73000.05.04562231
Produced by FastQC (version 0.11.5)