FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14406942
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGTAG21700.09.9539173
AGTGAGT32450.08.2095541
GTGAGTA33250.08.012032
GAGTAGG37555.456968E-126.1358194
CTAGGAG7054.1836756E-116.127659350-54
AGTAGGA42302.5465852E-115.6170215
TAGGAAG42603.274181E-115.5774657
Produced by FastQC (version 0.11.5)