Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005088509 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16994566 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTAGATC | 2870 | 0.0 | 40.634933 | 8 |
TAATTAG | 4920 | 0.0 | 25.313892 | 5 |
TAGATCG | 5265 | 0.0 | 21.603487 | 9 |
ATTAGAT | 6080 | 0.0 | 19.89171 | 7 |
AATTAGA | 7035 | 0.0 | 18.112383 | 6 |
TTAATTA | 9865 | 0.0 | 14.595785 | 4 |
AATTTAA | 13225 | 0.0 | 11.259668 | 1 |
ATTTAAT | 13370 | 0.0 | 11.092327 | 2 |
TTTAATT | 16350 | 0.0 | 8.894113 | 3 |
AGTGTAG | 6680 | 0.0 | 5.1083436 | 35-39 |