FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088545

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088545
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14570638
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACCCTA27350.07.8976234
CCCTAAT23352.8012437E-107.40042836
CTAATAG23703.8744474E-107.29113968
ACCCTAA35603.4742698E-105.8651685
Produced by FastQC (version 0.11.5)