FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17065958
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGATC28650.018.3421678
TAATTAG43200.014.9972785
ATTAGAT56900.09.7416127
AATTAGA65400.09.35616
TTAATTA95700.07.9752034
TAGATCG65300.07.93730359
AATTTAA142950.06.0879391
ATTTAAT154950.05.81099942
TTTAATT195450.05.04699333
Produced by FastQC (version 0.11.5)