FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088571

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088571
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14369974
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTATA40500.010.6666679
AACACTA39600.010.1818187
ACACTAT45850.09.57906158
AAACACT76600.05.82767636
TATTTAG46050.05.7850169
ACCAAAC77950.05.54201463
CCAAACA89750.05.0540394
Produced by FastQC (version 0.11.5)