FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16166754
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT202000.05.930307140-144
CACGTCT201900.05.769224140-144
AGCACAC238350.05.3702164140-144
GAGCACA256750.05.271359140-144
GATCGGA365250.05.1600585140-144
AGAGCAC269450.05.140461140-144
ACACGTC235050.05.120958140-144
GCACACG249800.05.095245140-144
CAGTCAC115450.05.0633426140-144
ACGTCTG211300.05.0560293140-144
Produced by FastQC (version 0.11.5)