FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088763

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088763
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16166754
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTAGGG167750.05.4160194140-144
GTGTAGG187100.05.2637553140-144
GTAGGGA160850.05.2276344140-144
CGTGTAG200900.05.2246957140-144
TCGTGTA216900.05.2110295140-144
GATCGGA364450.05.1359267140-144
GAGTGTA111750.05.03782140-144
Produced by FastQC (version 0.11.5)