FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005088803

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005088803
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16507472
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGATC25050.017.2424878
TAATTAG42650.012.6590145
ATTAGAT51900.09.8480147
AATTAGA67200.08.4628286
TAGATCG55700.08.271449
TTAATTA105450.06.41854054
AATTTAA135450.05.5625491
ATTTAAT133650.05.49764972
Produced by FastQC (version 0.11.5)