Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005089094 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12110332 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 55 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCCCTAG | 875 | 0.0 | 49.365524 | 2 |
CCCTAGA | 980 | 0.0 | 45.545765 | 3 |
CCTAGAA | 1020 | 0.0 | 43.052074 | 4 |
CTAGAAG | 1080 | 0.0 | 40.669365 | 5 |
AGCCCTA | 3570 | 0.0 | 13.653622 | 1 |
TAGAAGT | 4500 | 0.0 | 10.5607 | 6 |
GAAGTTA | 4825 | 0.0 | 9.99859 | 8 |
CCCTAGG | 485 | 1.8189894E-12 | 8.014975 | 50-54 |
AAGTTAT | 6255 | 0.0 | 7.827857 | 9 |
CTAGGTT | 590 | 3.6379788E-12 | 7.0766935 | 55-59 |
CCTAGGT | 480 | 2.7961505E-8 | 6.598748 | 50-54 |
TCCCTAG | 585 | 8.3127816E-10 | 6.398786 | 50-54 |