FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005089209

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005089209
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18571365
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAGGGG54800.021.278099
ATAAGGG132700.09.1124788
GTGATTA139400.09.0590392
AGTGATT159900.08.1485241
CTAGGAG40600.06.382735750-54
AGCATGA217150.06.3641379
CAGCATG233950.05.81482848
TATAAGG219500.05.6401687
GATCGGA132650.05.37765841
AGAGCAC150100.05.13099058
Produced by FastQC (version 0.11.5)