FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005089210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005089210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18571365
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAGGGG55850.022.5546559
ATAAGGG130100.010.1804948
GTGATTA143100.09.4626612
AGTGATT158250.08.6576771
AGCATGA217300.06.95634179
CTAGGAG40650.06.94204750-54
TATAAGG214300.06.68444067
CAGCATG243800.06.3184198
CCTTCAG269900.05.8707214
GTTCCTT277000.05.82840971
GATCGGA142200.05.3642741
TTCTAGG57650.05.094749550-54
Produced by FastQC (version 0.11.5)