FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005089366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005089366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19371019
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCTCA68650.012.7914246
AGTCCCC82650.011.7146811
GTCCCCT89350.010.3385842
CCCCTCT97050.09.6670394
CTCTCAA101700.08.9176247
CCCTCTC122150.08.1316465
TCCCCTC139800.06.9174063
TAGGGGG36001.0913936E-116.19810257
TCCTAGG7751.8189894E-126.1306855-59
ACTCGAA110650.05.9870331
ATACCCC121800.05.4958559
TTCACTC97100.05.41131978
CCTAGGG9001.5097612E-105.279196355-59
TCTCAAA189500.05.05175168
Produced by FastQC (version 0.11.5)