Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005089648 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15364557 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGTGAGT | 3660 | 0.0 | 7.3445644 | 1 |
AGAGCAC | 10905 | 0.0 | 6.733887 | 8 |
GAGCACA | 11485 | 0.0 | 6.331342 | 9 |
GAGCCCA | 5425 | 0.0 | 6.104689 | 9 |
GTGAGTA | 3975 | 2.7284841E-11 | 5.795922 | 2 |
TAAGGGG | 4030 | 4.0017767E-11 | 5.7167654 | 9 |
GATCGGA | 14620 | 0.0 | 5.4165716 | 1 |
TCGGAAG | 15300 | 0.0 | 5.0821853 | 3 |