FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005089667

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005089667
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17107500
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA205800.09.617879
AGAGCAC208200.09.6107428
GATCGGA223950.08.9066051
TCGGAAG239050.08.4233343
ATCGGAA288450.07.4061032
AAGAGCA319150.06.7883547
GTCACTA67600.06.410001825-29
AGTCACT71750.05.97905725-29
CTAGATC16800.05.7432637140-144
GGAAGAG392300.05.59579325
CGGAAGA390700.05.52328734
GAAGAGC388350.05.5231376
Produced by FastQC (version 0.11.5)