FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005089668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005089668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17107500
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA224200.09.1171811
TCGGAAG241500.08.4116263
AGAGCGT254500.08.2869818
GAGCGTC272450.07.76735549
ATCGGAA291700.07.1616122
AAGAGCG301050.07.0056637
TAGATCT64100.06.67051940-44
GAAGAGC390550.05.695116
TGTGTAG74850.05.635558640-44
GGAAGAG409800.05.4978475
CGGAAGA400700.05.46473554
GTTGTGT91050.05.07557235-39
TTGTGTA92850.05.03919735-39
GAGTGTA89100.05.025363425-29
Produced by FastQC (version 0.11.5)