FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005089699

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005089699
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19151584
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCTAA14550.012.3719493
GATCGGA140550.08.2473961
CGTCTAA26609.094947E-117.0380583
AGAGCAC199400.06.2459298
GAGCACA222900.05.74891669
CGACTAA23152.7854367E-55.5986413
AGATCTA39202.14186E-85.1434782
ATCGGAA253850.05.134362
Produced by FastQC (version 0.11.5)