FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005089767

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005089767
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16600571
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGTCC9750.09.896811575-79
CTAGATC10800.09.46412140-144
TAACTAG10250.09.131384135-139
GAGCTAG10750.08.9738850-54
ACTAGAT11400.08.968104135-139
CTAGTTA7650.08.280992585-89
AGCTAGA12900.07.70146450-54
GCTAGTC13900.07.25284575-79
GATCTAG7550.07.05641180-84
AACTAGA13900.06.9407616135-139
GGCTAGT13600.06.77744875-79
CTAGAAA19000.06.13826150-54
AGGCTAG15900.06.068800475-79
GCTAGAA16950.06.031183750-54
ATCTAGT8600.06.02691785-89
TCTACTA53700.05.9465871
CTATTCT71050.05.67327835
GATCGGA111750.05.52027561
AAAGGAC108250.05.3195179
ACTATTC68500.05.2539944
Produced by FastQC (version 0.11.5)