FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005089771

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005089771
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17381379
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCTAA19550.09.9400273
TAGGCTA34200.09.6805992
TTAGGCT37450.07.7117891
GAGCTAA38450.07.1130823
TAGAGTA37951.8189894E-126.2585352
AGGCTAA58700.06.2532043
TGAGCTA46650.06.01704842
TAGATCG69750.05.5541105140-144
AGTGTAA61550.05.37898453
GTAGCTA44004.4929038E-105.2344112
GATCGGA231150.05.1961136140-144
Produced by FastQC (version 0.11.5)