FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005089797

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005089797
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15156195
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA49750.015.0496077
ACACTAT55800.013.67592058
CACTATA56950.013.5261739
AAACACT86950.09.1904526
ACCAAAC95000.08.1112343
CAAACAC100700.07.86397935
CCAAACA105400.07.37921054
GCCCTTA65050.06.42107064
TACCAAA152350.05.71965272
TAGCCCT68050.05.3972042
TATTTAG83850.05.2373519
ATACCAA186000.05.14329051
Produced by FastQC (version 0.11.5)