FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005089810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005089810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14868085
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA324800.05.860558140-144
TAGATCG109550.05.822572140-144
CTAGATC33400.05.690508140-144
AGATCGG381750.05.5746675140-144
GTAGGGA142350.05.381182140-144
TGTAGGG154900.05.3356094140-144
TCGTGTA183250.05.1701775140-144
TCGGAAG334050.05.159484140-144
GTCGTGT199150.05.1333585140-144
TAGGGAA152000.05.086912140-144
CGTGTAG188000.05.0701838140-144
ATCGGAA372650.05.0500774140-144
Produced by FastQC (version 0.11.5)