FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005089827

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005089827
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17046945
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT26108.7639273E-75.81115251
GTGAGTA32054.112735E-85.6160582
AGGCTCC118000.05.61363945
TAACCCC47155.475158E-105.03930859
Produced by FastQC (version 0.11.5)