FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005089834

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005089834
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14610681
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAGAC28000.010.5416656
TTAGACC27550.09.9299117
TAGACCC31500.08.68473158
TAGTTAG40400.07.1279074
AGACCCC49150.05.8589519
TTAGTCC28351.1790871E-75.8406099
AGTTAGA56800.05.1965955
Produced by FastQC (version 0.11.5)