FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005090331

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005090331
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16306569
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCTAAT50050.020.0605641
CTAATTG56650.018.4292053
CCTAATT66500.015.3740372
TAAGGGG43150.09.6779739
GTTTAAA129200.08.5264089
AGTGAGT43750.08.4202411
TGTTTAA143550.08.0251898
TAATTGT142300.07.5391074
GTGAGTA49000.07.0528782
CTAGGAG13150.06.022620750-54
AATTGTT204400.05.4951845
TTGTTTA217900.05.31994537
CCCCCCC84450.05.098237525-29
CCCCACC114800.05.0336211
Produced by FastQC (version 0.11.5)