FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005090344

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005090344
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19627950
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA274050.06.67742061
AGAGCGT272000.06.66987568
TCGGAAG288500.06.3636613
TAGTGTA67250.05.6955835-39
ATCGGAA325500.05.6846052
AAGAGCG327300.05.65292457
GAGCGTC332650.05.43215669
AGTGTAG72850.05.27748240-44
Produced by FastQC (version 0.11.5)