FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005090346

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005090346
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15621132
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGCTA29150.014.3227536
ACGCTAC62400.07.38412677
GCTACTG63150.07.0683259
CGCTACT72050.06.29513078
AGGTACG78100.05.89890673
AAGGTAC87550.05.5911652
GTACGCT88150.05.55298385
Produced by FastQC (version 0.11.5)