FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005090347

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005090347
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16549368
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA202200.09.0046099
AGAGCAC217150.08.6828918
GATCGGA238250.07.89828731
TCGGAAG244100.07.6493953
ATCGGAA266950.07.1300312
AAGAGCA282300.06.9594467
GGAAGAG344150.05.6459745
CGGAAGA361150.05.36028054
GAAGAGC413300.05.032176
Produced by FastQC (version 0.11.5)