FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005090390

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005090390
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13594516
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA248900.09.3724391
TCGGAAG265750.08.8052683
TAGATCT60150.08.30723240-44
GAGCGTC287850.08.3043269
AGAGCGT282450.08.2846528
ATCGGAA296550.08.2306532
AAGAGCG315950.07.7024857
CGGAAGA361900.06.58524474
GGAAGAG410750.06.0650035
GAAGAGC414900.06.00433836
AGATCTC90850.05.86461245-49
GTAGATC92500.05.573189740-44
AGTGTCA88700.05.503494725-29
GAGTGTC95250.05.064566625-29
Produced by FastQC (version 0.11.5)