FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005090399

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005090399
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14384631
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGTAG17802.165807E-56.471913
GAGCACA130200.06.3594479
AGAGCAC140200.06.316698
AGTGAGT21605.8494697E-55.66666651
TCGGAAG166000.05.3783133
GATCGGA168750.05.3761
ATCGGAA192500.05.1241562
Produced by FastQC (version 0.11.5)