FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005090991

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005090991
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15958559
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA257500.07.10233839
AGAGCAC270150.06.5565448
CTAGATC18300.05.9016857135-139
TCGGAAG333000.05.51610763
GATCGGA332200.05.50770761
AAGAGCA351450.05.30630167
CACACGT164300.05.1797104140-144
ATCGGAA373350.05.07430272
Produced by FastQC (version 0.11.5)