FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005090992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005090992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15958559
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGATC30750.06.420535140-144
CTAGATC18100.06.0510507140-144
AGAGCGT323800.05.62519458
GATCGGA331250.05.54880671
TAGATCG92300.05.4646473140-144
TAGATCT70250.05.411055640-44
TCGGAAG336900.05.36369233
AAGAGCG369350.05.14588077
GAGCGTC377400.05.01704179
Produced by FastQC (version 0.11.5)