FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14779815
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCTAG11300.014.01646780-84
CTAGATC15150.013.018357140-144
CTAGTCC16000.012.51185575-79
GAGCTAG16100.011.71557450-54
TCTACTA79150.011.1861091
GCTAGTC18350.011.06649275-79
ACTATTC85500.010.6916564
TCTTGTG95450.010.3402991
GGCTAGT19700.010.01569975-79
CTACTAT92750.09.6288682
CTATTCT99050.09.2290415
CTTGTGG108350.08.9737162
ACTAGAT23400.08.79993135-139
TACTATT108900.08.4650113
AGCTAGA24400.08.0844250-54
AGGCTAG24300.08.06045475-79
GCTAGAA26700.07.81942650-54
ACCCCCC25050.07.64446525-29
TAACTAG28800.07.3499413135-139
AACTAGA30350.06.9745736135-139
Produced by FastQC (version 0.11.5)