FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091049

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091049
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16966553
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA36050.011.5839267
CACTATA45750.010.229319
ACACTAT44400.09.8917018
AAACACT83350.05.96108346
CCAAACA98050.05.50801854
GCCCTTA59600.05.4368574
ACCAAAC87250.05.2817093
Produced by FastQC (version 0.11.5)