FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13813524
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCTAGG6600.07.854437465-69
GCTAGGT7100.07.3014293110-114
GTCCTAG6500.07.08948750-54
CTAGGGG6600.06.981575570-74
CTAGGTG8900.06.1483326110-114
CCTAGGG7801.0004442E-105.72299865-69
CACCTAG8853.6379788E-125.69483765-69
GGCTAGG8652.8012437E-105.3271832110-114
Produced by FastQC (version 0.11.5)