FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091540

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091540
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16030753
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTAGA8750.043.6072358
ACACTAG9200.042.2568057
ACTAGAC9850.039.468299
TACACTA29250.013.291036
GTACACT39250.010.821895
CTAGACC10150.08.36963810-14
GCTAGCT11200.07.586139135-139
CTAGCTG13400.06.9854665135-139
TGCTAGC12950.06.6721883135-139
AAGGTAC72400.06.36979062
GGTACAC72450.06.16089874
AGGTACA79950.05.58295253
Produced by FastQC (version 0.11.5)