FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14255825
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCTAG7650.09.22161380-84
CTAGATC10500.07.2733684140-144
CTAGTTA11100.06.74423785-89
CTATTCT72950.06.51182945
GATCGGA137350.06.28618861
ACTATTC64000.06.0730564
TAACTAG10000.05.908569135-139
GCTAGTC11050.05.472461775-79
GAGCTAG11950.05.300853350-54
TCGGAAG174600.05.2766623
CTAGTCC9951.6370905E-115.20924975-79
ACTAGAT12150.05.1002407135-139
TCTACTA70850.05.06046341
CTACTAT79900.05.04594952
Produced by FastQC (version 0.11.5)