FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091559

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091559
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14096021
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCTAA13852.9900338E-46.75748166
CTAGATC17750.05.5168443140-144
CACACGT154500.05.312837140-144
AGTCACA75350.05.16013140-144
CACGTCT153950.05.1540904140-144
GATCGGA330600.05.039769140-144
Produced by FastQC (version 0.11.5)