FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091601
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14052804
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGTCC7800.07.385721775-79
GGCTAGT7150.06.84857875-79
GAGCTAG7900.06.743375350-54
GATCTAG8000.06.119640480-84
AGGCTAG8659.094947E-125.660963575-79
GCTAGTC8751.0913936E-115.596266775-79
ACTATTC54651.0913936E-115.0052274
CTAGATC11801.8189894E-125.0022054140-144
Produced by FastQC (version 0.11.5)