FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14052804
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTAGTC7350.06.855891775-79
CTAGTCC7607.2759576E-126.062051375-79
GGCTAGT8101.8189894E-126.043341675-79
GAGCTAG8551.8189894E-125.892683550-54
CTAGATC13350.05.616633140-144
AGGCTAG9605.456968E-125.399014575-79
ACTATTC52952.1827873E-115.02979564
GATCTAG9506.7484507E-105.00132180-84
Produced by FastQC (version 0.11.5)